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Step

Example

1. Launching the UIMA CAS Visual Debugger (CVD) or the Collection Processing Engine (CPE) from Eclipse can now be accomplished in the ctakes-clinical-pipeline project. Navigate to:

Code Block
ctakes>ctakes-clinical-pipeline/resources/launch/UIMA
  >resources
    >launch
      >UIMA_<CVD | CPE>GUI--clinical_documents pipeline.launch

where you must select between CVD and CPE in the command. Other Run Configurations are also available in the Eclipse Run menu.



2. (Optional) Process data.

Now that you can launch the tools, the User Guide has steps to walk you through processing test data if you want to go there.

No example

...

Step

Example

1. Launching the UIMA CAS Visual Debugger (CVD) or the Collection Processing Engine (CPE) from Eclipse can now be accomplished in the ctakes-clinical-pipeline project:

Code Block
export MAVEN_OPTS="-Xmx2g -Xms1g"
mvn -Prun<CVD | CPE> compile

where you must select between CVD and CPE in the command. Other Run Configurations are also available in the Eclipse Run menu.


(Optional) Process data.

Now that you can launch the tools, the User Guide has steps to walk you through processing test data if you want to go there.

No example

Next Steps

The cTAKES 3.0 Component Use Guide\ will help you to understand, in great detail, each of the cTAKES components that have been installed. In some cases you can learn how to improve the components.

Also, before you go on to process text in production you will need to consider dictionaries and models. cTAKES does not distribute from Apache a complete dictionary capable of annotating production data. The models provided have been trained on data that may not match your data well enough to be effective. In most cases, you will need to modify the dictionaries and train models\ on your own data to be effective.