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1. If you do not have a UMLS username and password, you may request one at UMLS Terminology Services.

No example

2. Edit the following files. Add Find the line in each script that runs java and add the ctakes.umlsuser and ctakes.umlspw parameters to the java command found in the file.adding in your UMLSwith your credentials. Make sure you substitute your actual ID and password if you cut and paste the example.

Windows:

<cTAKES_HOME>\bin\runctakesCVD.bat
<cTAKES_HOME>\bin\runctakesCPE.bat

Linux:

<cTAKES_HOME>/bin/runctakesCVD.sh
<cTAKES_HOME>/bin/runctakesCPE.sh

3. You will select an aggregate when you run cTAKES (continue reading).