THIS IS A TEST INSTANCE. ALL YOUR CHANGES WILL BE LOST!!!!
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Diagram 1. Piper files used in the cTAKES default Clinical Pipeline. Upper left is DefaultFastPipeline.piper
| cli | Equivalent Parameter Name | Description |
|---|---|---|
| -p | Piper | Location of a Piper file. |
| -i | InputDirectory | Directory for all input files. |
| -o | OutputDirectory | Directory for all output files. |
| -s | SubDirectory | Subdirectory for files. |
| -l | LookupXml | Path to fast dictionary lookup xml. |
Table 3. Reserved cli characters and their corresponding parameter names.
| CLI | Equivalent Parameter Name | Description |
|---|---|---|
| --user | umlsUser , ctakes.umlsuser | UMLS Username for dictionary lookup. |
| --pass | umlsPass , ctakes.umlspw | UMLS Password for dictionary lookup. |
| --xmiOut | OutputDirectory | Adds FileTreeXmiWriter to pipeline. |
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