THIS IS A TEST INSTANCE. ALL YOUR CHANGES WILL BE LOST!!!!
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Annotator | Description | Example Piper file |
|---|---|---|
Clinical Pipeline | The pipeline to obtain concepts and their attributes | <cTAKES_HOME>/TBD\resources\org\apache\ctakes\clinical\pipeline\DefaultFastPipeline.piper |
Chunker | Obtains phrasal chunk annotations | <cTAKES_HOME>/TBD |
Dependency Parser | Obtains dependency parsing tree | <cTAKES_HOME>/TBD |
Drug NER | Finds mentions of medications and medication attributes such as dose, strength, frequency... | <cTAKES_HOME>/TBD |
Dictionary Lookup | Finds mentions of concepts from a dictionary (e.g., SNOMED CT or RxNorm | <cTAKES_HOME>/TBD |
Dictionary Lookup Fast | Finds mentions of concepts from a dictionary (e.g., SNOMED CT or RxNorm | <cTAKES_HOME>/TBD |
Relation Extractor | Finds certain relations (location of and degree of) between certain Event, Entity, and Modifier annotations | <cTAKES_HOME>/TBD |
Smoking Status | Finds document or patient-level smoking status | <cTAKES_HOME>/TBD |
Side Effect | Finds side effect mentions and sentences from clinical documents | <cTAKES_HOME>/TBD |
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