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• Import Project > Maven > Checkout Maven Project from SCM and use: svn and https://svn.apache.org/repos/asf/ctakes/trunk
• Select all projects.
• Wait until Eclipse downloads and builds all of your projects (it may take up to 30 minutes depending on the machine).
  • The various build helpers should run jcasgen and build the projects for you. There should not be any reason to run mvn install, etc.
• Merge the version-matching resources ZIP file from http://sourceforge.net/projects/ctakesresources/files/ into your ctakes-dictionary-lookup-res project.
• (Optional) If you would like to launch the UIMA CVD or CPE GUI, run ctakes-clinical-pipeline/resources/launch/UIMA_<CVD | CPE>GUI--clinical_documents pipeline.launch
• (Optional) UIMA plug-ins called "UIMA Eclipse tooling and runtime support" can be installed from update site: http://www.apache.org/dist/uima/eclipse-update-site

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While noting the things above, see the cTAKES + 3.0 + Developer + Install + Guide for the step-by-step instructions.