Apache Airavata

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Amber:
02_Heat.rst: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/Stampede/Amber/02_Heat.rst
03_Prod.in: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/Stampede/Amber/03_Prod.in
prmtop: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/Stampede/Amber/prmtop

GROMACS:
pdb1y6l-EM-vacuum.tpr: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/Stampede/GROMACS/pdb1y6l-EM-vacuum.tpr

LAMMPS:
in.friction: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/Stampede/LAMMPS/in.friction

ESPRESSO:
Al.sample.in: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/Stampede/ESPRESSO/Al.sample.in
Al.pz-vbc.UPF: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/Stampede/ESPRESSO/Al.pz-vbc.UPF

NWCHEM:
water.nw: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/Stampede/NWCHEM/water.nw

Trinity:
reads.left.fq: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/Stampede/Trinity/reads.left.fq
reads.right.fq: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/Stampede/Trinity/reads.right.fq

Autodock:

AD4_parameters.dat: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/BigRed2/Autodock/AD4_parameters.dat
hsg1.A.map: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/BigRed2/Autodock/hsg1.A.map
hsg1.C.map: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/BigRed2/Autodock/hsg1.C.map
hsg1.d.map: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/BigRed2/Autodock/hsg1.d.map
hsg1.e.map: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/BigRed2/Autodock/hsg1.e.map
hsg1.HD.map: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/BigRed2/Autodock/hsg1.HD.map
hsg1.maps.fld: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/BigRed2/Autodock/hsg1.maps.fld
hsg1.NA.map: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/BigRed2/Autodock/hsg1.NA.map
hsg1.N.map: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/BigRed2/Autodock/hsg1.N.map
hsg1.OA.map: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/BigRed2/Autodock/hsg1.OA.map
ind.dpf: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/BigRed2/Autodock/ind.dpf
ind.pdbqt: https://github.com/SciGaP/XSEDE-Job-Scripts/blob/master/BigRed2/Autodock/ind.pdbqt
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For an overview of Apache Airavata visit the Website - https://airavata.apache.org/