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In the simple case we need only one root (ofbiz.home) and only one classpath.
In the second case there are as many as roots and classpathes couples as there are different instances. I have already in code all what is needed to deal with both cases, but an issue when writing to modules web.xml (the xml root node is readonly and I don't understand why).
In the simple case it's not a problem as we need only to write in the 1st web.xml file (in webtools's) and we can do it by hand (we don't need to dynamically put an intance instance number in it).

Thanks for any help on the readonly root node issue ... (I'm not an xml specialist, I must confess)

Miscellaneous experiences

Redeployment

You can't redeploy OFBiz modules (web apps actually) independently. You have to redeploy the whole ear more information on Geronimo forum.

Remote deployment

Remote deployment using the --inPlace option (for a totally exploded EAR with exploded and only exploded WARs inside as OFBiz is deployed above) is only possible if you exactly replicate the deployed directory structure on both the client and the server machine. If you are on Windows you must even replicate the drive more information on Geronimo forum. I have open a Jira issue for this https://issues.apache.org/jira/browse/GERONIMO-3963^{Image Added}