THIS IS A TEST INSTANCE. ALL YOUR CHANGES WILL BE LOST!!!!
The following are not part of Apache cTAKES but may be of interest to cTAKES users.
| Name | When used | Site | Description | License |
|---|---|---|---|---|
| Anafora | https://github.com/weitechen/anafora | web-based raw text annotation tool | https://github.com/weitechen/anafora#download-anafora | |
| Annotation Viewer | post | https://github.com/GeisingerBTI/AnnotViewer | view cTAKES' annotations from XMIs in a batch | https://github.com/GeisingerBTI/AnnotViewer/blob/master/LICENSE |
| Command line tool | https://github.com/giuseppetotaro/ctakes-clinical-pipeline | A command line tool based on Apache cTAKES in order to run the complete pipeline for annotating clinical documents in plain text format using the built in UMLS (SNOMEDCT and RxNORM) dictionaries. | https://github.com/giuseppetotaro/ctakes-clinical-pipeline#license | |
| MIST | pre | http://mist-deid.sourceforge.net/ | a suite of tools for identifying and redacting PII in free-text medical records | See "What license does it have?" on http://mist-deid.sourceforge.net/ |
| RESTful interface | https://github.com/dirkweissenborn/ctakes-server | unknown | ||
UMLS and NLM tools such as | https://www.nlm.nih.gov/research/umls/implementation_resources/applications.html | NLM applications utilize UMLS data. | https://uts.nlm.nih.gov//license.html |
Definitions
PII = personally identifiable information
MIST = MITRE Identification Scrubber Toolkit
NLM = U.S. National Library of Medicine
UMLS = Unified Medical Language System