Apache Airavata

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  1. Tutorial Discussion and Notes Google Doc
    1. Please add your name and interests and follow the above document for references. 
  2. Custos Security Tutorials
  3. Tutorial Details
    1. Login to a test instance of the Airavata Django Portal testdrive.airavata.org
    2. Gateway Hands-on exercise documentation
    3. Custos portal 
    4. Custos documentation
  4. Gaussian Input Files
    1. npentane12diol.inp
    2. isopentane12diol.inp


For any follow-up and questions, you can email our group list circ at iu.edu

Agenda 

Topic

Primary Contact

Notes

Reference Papers
WelcomeSuresh Marru
  • Introduce the tutorial

Custos

Isuru RanawakaCustos Security Services

Virtual Cluster System

Dimuthu Upeksha

  • Presentation

The Science Gateways Platform as a Service (SciGaP)Suresh Marru
  • Presentation
SciGaP short paper

Airavata Django Portal

Marcus Christie

Django portal for Airavata

&

Wagtail for Home Page

Airavata Managed File Transfer (MFT)

Dimuthu Upeksha

  • Presentation
Manage File Transfer (MFT)

Airavata Data Lake

Suresh Marru
  • Presentation

Tutorial wrap up with Q & A

Suresh Marru

Important Information

  1. Tutorial Abstract - https://docs.google.com/document/d/1s_UXp4jvRgfwMMzixI4bzg8fi2qsSnim7RwVXLAJv18/edit?usp=sharing 
  2. Airavata: http://airavata.apache.org/ 
  3. Apache Way: http://www.apache.org/theapacheway/ 
  4. Custos Site: https://airavata.apache.org/custos/, Custos Security Framework
  5. SciGaP Site: https://scigap.org/ 
  6. CIRC site: https://circ.iu.edu/
  7. Contact us: circ@iu.edu

GitHub Links (check the “develop” branch for the most activity): 

  1. Main Airavata: https://github.com/apache/airavata
  2. Django Portal: https://github.com/apache/airavata-django-portal
  3. Custos: https://github.com/apache/airavata-custos/tree/develop
  4. Custos Client SDK’s: https://cwiki.apache.org/confluence/display/CUSTOS/Important+Links+and+Resources 
  5. MFT: https://github.com/apache/airavata-mft/tree/develop
  6. Data Lake: https://github.com/apache/airavata-data-lake

Papers 

(see https://scholar.google.com/scholar?q=Marlon+Pierce+Suresh+Marru&hl=en&as_sdt=0,15 for a full list):

  1. SciGaP short paper: https://dl.acm.org/doi/abs/10.1145/3219104.3229240
    1. This paper is an overview of the hosting services that we operate for clients using Airavata middleware pieces and the Django front end. 
  2. Data and API Model Paper: https://ieeexplore.ieee.org/abstract/document/7021845. 
    1. These are also in the Airavata GitHub repository.  
  3. Job and task management with Helix: https://dl.acm.org/doi/abs/10.1145/3332186.3332233
  4. Managed file transfer: https://arxiv.org/abs/2107.03882
  5. Custos security services: https://dl.acm.org/doi/abs/10.1145/3311790.3396635
  6. Django Portal: https://dl.acm.org/doi/abs/10.1145/3311790.3396650.
    1. See also https://dl.acm.org/doi/abs/10.1145/3219104.3229272 for more on our choice of Wagtail.

Detailed Technical Tutorials are PEARC21 

  1. Airavata + Django: https://cwiki.apache.org/confluence/display/AIRAVATA/PEARC+2021+Airavata+Tutorial 
    1. Recording: https://pearc21.pathable.co/meetings/virtual/zowuAKhjsnBZZFh4M   
  2. Custos: https://cwiki.apache.org/confluence/display/CUSTOS/PEARC21+Custos+Tutorial
    1. Recording: https://pearc21.pathable.co/meetings/virtual/Kc6CMZrgsAENYes8A  (see particularly the lightweight Learning Management System example that our team put together to illustrate the capabilities).
  1. XSEDE Virtual Clusters
  2. Launch Computational experiment in tutorial Portal 
  3. Custos Hands-on Steps
  4. SciGaP Gateways to browse
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For an overview of Apache Airavata visit the Website - https://airavata.apache.org/